This post lists all my ongoing projects and to-do list.

Hawaii 2023

Analysis and writing

• Finalize RNAseq differential gene expression and functional enrichment analyses
• Conduct WGCNA correlation analyses
• Finalize results section
• Outline discussion main points

Moorea 2023

Data collection and analysis

• Update methods section
• ITS2 sequencing analysis
• RNAseq analysis
• Metabolomics analysis
• ITS2 sample sequencing for POC larvae

E5 Physiology

Final manuscript

• Revise based on coauthor comments
• Post on bioRxiv (late Oct)
• Submit manuscript (late Oct)

E5 Metabolism

Data analysis

• Metabolomics and lipidomics analysis for timeseries metabolism paper

E5 Nom Nom

Data analysis

• Analyze PR rates data set

Resazurin methods manuscript

Analysis and writing

• Submit early November to journal
• Revise post technical review

Oyster 2024 Stress Hardening

Data collection and analysis

• Goose Point
  • Image analysis of Oct assessment [Noah]
• Sequim
  • Image analysis of Oct assessment [Noah]
• Baywater
  • Conduct Oct assessment
  • Image analysis of Oct assessment [Noah]
  • Image analysis of initial outplant images [Ariana]
• Westcott
  • Conduct Dec assessment
  • Image analysis of Dec assessment [Grace]
• Assemble manuscript/note of data from 10K outplant seed, PolyIC outplant seed, hardening efforts outplant seed

Manchester Hardening

Data collection

• Winter/fall assessment (Nov?)
• Image analysis of winter assessment

Oyster Lifestage Carry Over

Analysis and writing

• Analyze qPCR results
• Introduction
• Methods
• Results
• Discussion

PolyIC Larvae

Data collection and experiments

• Write physiology/performance paper

Planning and funding

• IOS submission with Hollie (September/October 2025)