All Projects To Do List

This post lists all my ongoing projects and to-do list.

Hawaii 2023

Analysis and writing

  • Finalize RNAseq differential gene expression and functional enrichment analyses
  • Conduct WGCNA correlation analyses
  • Finalize results section
  • Outline discussion main points

Moorea 2023

Data collection and analysis

  • Update methods section
  • ITS2 sequencing analysis
  • RNAseq analysis
  • Metabolomics analysis
  • ITS2 sample sequencing for POC larvae

E5 Physiology

Final manuscript

  • Post on bioRxiv (late Oct)
  • Submit manuscript (late Oct)

E5 Metabolism

Data analysis

  • Metabolomics and lipidomics analysis for timeseries metabolism paper

E5 Nom Nom

Data analysis

  • Analyze PR rates data set

Resazurin methods manuscript

Analysis and writing

  • Submit early October to journal
  • Revise post technical review

Oyster 2024 Stress Hardening

Data collection and analysis

  • Goose Point
    • Conduct fall assessment
  • Sequim
    • Analyze October images
  • Baywater
    • Analyze August images
    • Conduct fall assessment
  • Westcott
    • Conduct fall/winter assessment

Manchester Hardening

Data collection

  • Winter/fall assessment

Oyster Lifestage Carry Over

Analysis and writing

  • Analyze qPCR results
  • Introduction
  • Methods
  • Results
  • Discussion

10K Seed

Data collection and analysis

  • Analyze summer growth from outplant assessment photos

PolyIC Larvae

Data collection and experiments

  • Write physiology/performance paper

Planning and funding

  • IOS submission with Hollie (September/October 2025)
  • Look at USDA funding calls
Written on October 1, 2025