August goals and daily notebook entries.

Goals

Writing and manuscripts

1. Methods and results for Mcap2023 analysis
2. Finish full draft of E5 physiology ms
3. ~~Draft resazurin assay manuscript~
4. Map out LCO data and hardening data for inclusion in manuscript
5. Submit resazurin manuscript
6. PolyIC manuscript draft

Analysis

1. Phenoplate and RLC analyses for Hawaii 2023
2. Revisit respiration scripts for Hawaii 2023 and Moorea 2023 analysis using recent updates with oyster scripts
3. Bioinformatics for RNAseq Hawaii 2023 data when available
4. E5 time series machine learning

Field work

1. Field assessments for Baywater
2. Map out next set of outplants - PolyIC
3. Field assessments at Goose Point
4. Field assessments at Manchester

Funding

1. Write IOS grant with HP
2. eScience AI proposal
3. Funding search - aquaculture

Lab experiments

1. Flow cytometer assay testing (UG project)
2. Resazurin oxygen testing
3. Metabolomics processing for Moorea2023

Daily Log

August 26

• Data management from Goose Point assessment
• E5 physiology manuscript writing
• PolyIC manuscript writing

August 25

• Goose Point assessment

August 22

• E5 timeseries analysis meeting
• Resazurin manuscript

August 21

• Metabolomics processing on campus
• Baywater survival analysis

August 20

• Baywater assessments

August 19

• Resazurin paper
• Metabolomics extractions in lab

August 18

• Resazurin paper writing

August 15

• E5 molecular meeting
• Resazurin results and writing
• Meeting with Lucy

August 14

• Metabolomics preps on campus
• E5 paper
• PolyIC paper
• Resazurin paper

August 13

• Resazurin measurements on campus
• VIMS data analysis
• PolyIC paper
• Resazurin paper

August 12

• Oxygen measurements on campus
• Resazurin paper
• Metabolomics prep work
• AI proposal

August 11

• Locating oyster outplants at Baywater
• Oyster data management
• Proof edits for ICB paper

August 8

• Resazurin paper
• E5 paper writing meeting
• Treq requests
• Planning PCSGA

August 7

• Meeting with Hollie for E5 manuscript
• NCEAS application
• eScience AI proposal
• Field assessment emails
• Prep metabolomics protocols

August 6

• eScience AI proposal
• E5 phys manuscript
• NCEAS program application
• Emails and purchasing