July 2025 Goals
July goals and daily notebook entries.
Goals
Writing and manuscripts
- Methods and results for Mcap2023 analysis
- Finish full draft of E5 physiology ms
- Draft resazurin assay manuscript
- Map out LCO data and hardening data for inclusion in manuscript
Analysis
- Phenoplate and RLC analyses for Hawaii 2023
- Larval size analysis for Hawaii 2023
Larval symbiont density analysis for Hawaii 2023 (UG project)- Project Nom Nom PR data analysis
VIMS resazurin analysis- Revisit respiration scripts for Hawaii 2023 and Moorea 2023 analysis using recent updates with oyster scripts
Field work
- Field assessments for Baywater
Outplant PolyIC seed from Point Whitney- Mechanical priming and outplant USDA families at Point Whitney
VIMS field trip- Map out next set of outplants - 10K, PolyIC, USDA
Funding
- Write BIO-OCE grant with HP
Lab experiments
Cell count processing for HI2023 (UG project)- Flow cytometer assay testing (UG project)
- Resazurin oxygen testing
- Metabolomics processing for Moorea2023
RNA extractions for Moorea2023
Daily Log
July 24
- Meeting with VIMS
- Meeting with Steven
- Respiration measurements
July 23
- Resazurin paper
- Completed paper review
- Larval size data
July 22
- Finished RNA extractions
July 21
- Oyster oxygen-resazurin correlation experiment resazurin measurements
- RNA extraction
- Cleaned lab
July 18
- Prepped oyster oxygen trials for next week
- RNA extractions
- E5 phys manuscript
- E5 molecular meeting
July 17
- Manchester oyster maintenance
July 16
- RNA extractions
July 15
- Omic paper revisions
- E5 physiology manuscript writing
- Larval size images
July 14
- RNA extractions for Moorea project
- Omic paper revisions
July 11
- Larval size analysis
- E5 physiology paper
- E5 molecular meeting
- Omic paper revisions
- Pacuta larvae paper revisions
July 10
- Sequim Bay outplants
- Larval size image analysis
July 9
- ICB paper revisions
- Reva Atea magazine
- Larval size image measurements
- Oyster project planning
- Resazurin data and paper
July 8
- RNA extractions on campus
- Guava Muse troubleshooting with Aakriti
- Planning projects with Noah
July 7
- VIMS trip data analysis
- E5 physiology manuscript
- IOS proposal with Hollie
- Resazurin manuscript
- Hawaii 2023 data analysis
June 30-July 3
- VIMS field trip for resazurin work
Written on July 21, 2025